CDS
| Accession Number | TCMCG016C05276 |
| gbkey | CDS |
| Protein Id | OMO94882.1 |
| Location | join(3688..3765,4003..4110,4352..4537,4897..4983,5078..5157,5310..5391,6218..6263,7024..7142,7322..7435,7522..7620,7727..7816,8195..8304,8523..8722,9647..9969,10124..10804,11029..11172,11276..11566,11662..11847,11924..12088,12189..12248,12486..12548,12699..12790,13059..13155,13574..13690,13826..14044,14502..14642,14713..14880,14959..15143,15331..15424,15514..15602,15762..15987,16396..16470,16769..16884,19769..19805,20206..20385) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_05725 |
Protein
| Length | 1715aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01007767.1 |
| Definition | RecF/RecN/SMC [Corchorus capsularis] |
| Locus_tag | CCACVL1_05725 |
EGGNOG-MAPPER Annotation
| COG_category | BD |
| Description | Structural maintenance of chromosomes protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K06674
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04111
[VIEW IN KEGG] map04111 [VIEW IN KEGG] |
| GOs |
GO:0000793
[VIEW IN EMBL-EBI] GO:0000796 [VIEW IN EMBL-EBI] GO:0003674 [VIEW IN EMBL-EBI] GO:0005215 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005694 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044427 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0044815 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGCTCAAAACCCTCTCCACATTTCTCTCTCCTCTCTCCCTTCCAAACAACCACAATCTCACTAAATTCAGCCCCCTTTTGACGGTTAACACCGCGGTCGCTTGTTGTTATGGCTGCGGAGCTCCGTTGCAGACTACGGAGCTTGATGCCCCGGGTTATGTTGATATCGATACTTATGAATTGAAAAAGAAACACCGCCAGCTAAGAACGATACTATGTGGGAGATGTAGGCTTTTATCTCATGGGCATATGATAACTGCTGTTGGTGGGAATGGAGGGTACCCTGGCGGGAAGCAGTTTGTTTCAGCAGATGAGCTTCGTGAAAAGCTCTCTCACTTGCGCCATGAGAAGGCTTTGATTGTAAAACTGGTTGATATTGTGGACTTCAATGGCAGCTTTTTATCTCGGGTGCGTGATATTGCTGGTGCGAATCCTATTATACTAGTTGTGACTAAGGTTGATCTCCTTCCCAAAGGGACTGATTTTAACTGTGTTGGTGATTGGGTTGTGGAGGCCACTACGAAGAAGAAGCTTAATGTTTTGAGTGTGCATCTTACTAGCTCGAAGTCCTTGGTAGGGATTGCTGGAGTGGCATCAGAAATTCAAAAGGAGAAGAAGGGATCAGCAAATGTGGGAAAATCTGCGTTCATAAGTGCTTTACTAAATATGATGGCAGAAAGGGATCCAGCAGCTGCAGCAGCTCAAAAGTACAAACCAATACAATCTGCCGTTCCTGGGACTACCTTGGGTCCAATTCAGATTAATGCATTTCTTGGAGGAGGGAAATTGTATGATACACCTGGAGTTCATCTTCATCATAGGCAAGCTGCAGTAGTTCACTCAGAAGATTTACCTGTCCTTGCTCCTCGAAGTCGCCTCCGAGGTCAATCGTTCCCTGCAGCCTCCAAAAATGGGATGGCAGGGACATTCAACTCCAATGGCTTAAAAGGTTTCTCAATATTTTGGGGTGGTCTTGTCAGAATTGATGTCTTGGAGGCTCTCCCAGAGACATGTTTGACATTTTATGGACCAAAGGGATTGCGCATTCATGTTATACCAACTGATGAAGCAGATGAATTTTACAAGAAAGAACTTGGAGTACTGTTGACACCGCCAACTGGAAAAGACAAAGCAGATGAATGGAGAGGACTAGAGACAGCAGAGCAGTTAAAAATAAAATTTGAAGATGCTGAAAGACCTGCTAGTGATGTGGCTATTTCAGGACTGGGTTGGATCACCATTGAACCGAAACGCAAGTCTCTTGGAATTTCTGAAAGTACTATTGCAGATACCATCAATGAATTGCATTTGGCAGTCCATGTACCCAAGCCAGTTGAAGTTTTCGTTCGGCCTCCTATTCCAGTAGGCAAGGCCGGAGCAGAATGGTATCAATATCGCGCGATGCACATCAAGGAGATATGTTTGGAAGGATTTAAATCCTATGCGACGAGGACGGTTGTCCCTGGCTTCGATCCATTCTTTAACGCCATAACGGGTTTGAATGGGTCGGGCAAATCGAACATTCTGGACTCTATTTGCTTTGTTTTAGGAATCACCAATTTGCAGCAAGTTCGAGCTGCAAATCTACAAGAGCTCGTTTACAAGCAAGGCCAAGCTGGAATTACCAAGGCCACGGTCTCCGTTATCTTTGATAACTCAGATAGATCCCGAAGTCCACTTGGTTACGAGGATCACTCAGAGATTACTGTAACTCGACAAATTGTGGTTGGTGGTAGGAACAAATATTTGATCAATGGAAAGCTAGCACAGCCGAGTCAAGTACAGAATCTTTTCCATTCAGTTCAGCTTAATGTTAATAATCCACATTTTCTCATCATGCAAGGTCGGATCACCAAAGTTTTAAATATGAAACCTCCTGAGATTCTATCTATGCTTGAAGAGGCTGCTGGTACTAGAATGTATGAAACAAAAAAAGAGTTTGCGTTAAAAACACTTGAGAAGAAACAGAGTAAGGTTGATGAGATTAATAAGCTTCTTGATCAGGAAATACTGCCGGCTTTGGAGAAGTTGAGAAAAGAACGAACCCAGTATATGCAATGGGCTAATGGGAATGCAGAGCTTGATAGACTTAAAAGGTTTTGCATTGCTTACGAGTATGTTCAAGCAGAGCGGATTAGAGATAGTGCAGTTGGTGAAGTGGAAAGAGTAAAGGCAAAGATTATGGAAATTGATAATGATACAGAAAGGACAATGGTGGAAATTCAGGATATGGAGACAAACATAGCGAAGTTGACTGCTGAAAGGGAAGCTACTATGGGTGGGGAAGTTAAAACTTTGTCAGATGAAGTAGATTTACTATCTAAAAGTATTGTTCAGGAAGTGTCTGTGCTGCACTCTAAAGAGGATACTCTCAAGGGTGAGAGAGAGAATGCTGAAAAGATTGTACAAAATATTGAAGATTTGAGGCAGTCTATAGAAGAGAAGGGTATTGCAGTGCAGAAGTCTGAAGAAGGAGCAGCTGACCTGAAAAAAAGAGTTGAGGATCTTTCTAAGAGTTTGGAAGAAAATGAAAGGGAATACCAGGCTGTCCAAGCTGGCAAGAACAGCGGCAATGAGGAGAAATGCCTAGAAGATCAACTAGTTGATGCTAAAGTTGCTGTTGGGACTGCTGAAACGGAATTGAAACAGCTGAAAACTAAAATTACCCATTGTGAAAAGGAGCTGGGAGAGAAAACACGCCAATTGATGTCAAAGCGTGAAGAAGCAGTTAGTGTGGAGAATGAGCTTAACTCCAGGCAAAATGATGTGGAAAGAATTAAAACTGAGTTGGAATCTCTTCCTTATAAAGAAGGCCAGATGGAAGCACTGCAAAAGGATCGCGCATCTGAGTTGGAGATGATCCAGAAGTTGAAAGATGGAGTGCGAGATCTTTCAGCACGCCTATCAAATGTACAGTTCACTTATCGCGATCCTGAGAAGAATTTTGATAGGTCAAGGGTGAAAGGAGTAGTTGCAAAACTAATAAAAGTGAAGGATAGCTCAACAATGACAGCCTTGGAGGTTACTGCAGGTGGAAAGTTATATAATGTGGTTGTTGACACTGAAAATACTGGAAAGCAACTGCTTCAGAAGGGTGATCTACGAAGAAGGGTAACAATTATACCTTTGAACAAAATTCAACCTAATACGGTTCCCCCTAGGGTTCAGCAGGATGCTATTAGATTGGTTGGCAAGGAGAATGCAAAGCTGGCACTTTCCTTGGTTGGTTATGATAAGGAATTGGAGAGTGCCATGGAATATGTATTTGGTGCTACTTTTGTATGTAAAACTACTGATGCTGCAAAGGAGGTTGCTTTTAGTCGAGAAATTCGCACTCCTAGTGTCACACTTGAAGGTGATATATTTCAACCTAGTGGTCTTTTGACTGGTGGAAGTCGCAGGGGTGGTGGTGATTTGCTACGGCAACTTCATGATATGGCAGAGTGTGAATCAAAACTTTCCGTACATCAGAAGAGGTTATCTGAAATCGAGGCAAAGATCGCAGAGCTCCTGCCACTTCAGAAAAGGTTCATGGACCTTAAAGCACAGTTAGAACTTAAAATGCACGACCTTTCCTTATTTCAGAGCAGAGCAGAGAAAAATGAGCATCATAAGCTTGGAGAAATGGTAAAGAGCATTGAGAAAGATCTTGAAGAAGCAAAATCAGCTATTAAAGAGAAACAGAGTTTGTATGAAAAGCATGTTAGCAAGGTTTTGGAACTTGAGAAATCAATCAGGGAGCATGATAATAGTAGGGAGGGCAGACTTAAAGATTTGGAGAGAAAGATTAAGGCTACAAAATCTCAAATGCAGTCTGATTCAAAGGATCTTAAGCGGCATGAAAATGAAAGAGAGAGACTTGTCATGGAACGGGAAGCAGTTGTGCAAGAACAAGCATCTTTAGAGAGTCAATTGGCTTCTTTGAGAACACAAATTAACAATCTTAATTTGGAAGTAGACGAACAATTGGCCAAGGTTAATTCTATAAAGAAGAATCGTGATCAATTGCAATCTCAGTTAGATTCAATACGTTTAAAGATGAAAGAGTGTGATTCTCAAATTAGCAGCATTCTTAAGGAGCAGCAAAAACTTCAGCACAAGCTTAGTGAGACAAAGCTTCAGAGAAAAAAGTTGGAAAATGAGGTAAAGCAAATGGAGATGGAGCAGAAAGATTCTTCTACAAAAGTAGACAGACTGATTGAGAAGCATGCCTGGATTGCTACTGAAAAGCAGCTTTTTGGCAGAAGTGGGACTGATTATGATTTTGCCTCCCGTGATCCTCGTAAAGCCAGGGAAGAACTTGACAAACTTCAAGCTGAACAATCAAGTCTTGAGAAAAGAGTAAACAAGAAGGTGATGGCAATGTTTGAAAAGGCAGAAGACGAGTATAATGATTTGATGTCCAAGAAAAACACTGTGGAGAATGACAAATCTAAAATTAAGAAGACAATTGAAGAGCTAGATGAGAAGAAGAAAGAAACATTAAAGGTCACGTGGGTTAAAGTTAACAATGACTTTGGATCCATCTTTTCTACTCTGTTGCCGGGAACCATGGCAAAGCTAGAACCGCCAGAAGGTTGTAGCTTCTTAGATGGTCTTGAGGTTCGTGTTGCGTTTGGAAGTGTTTGGAAACAGTCCTTGTCTGAACTGAGTGGAGGTCAAAGGTCTCTACTTGCACTTTCTCTGATCTTGGCTCTGCTACTGTTTAAGCCTGCTCCACTCTATATACTTGATGAGGTTGATGCAGCTCTTGATCTAAGCCACACTCAGAACATAGGGAGAATGATTAAAGCCCACTTTCCACACTCTCAGTTTATCGTCGTTTCACTGAAAGAGGGCATGTTTAACAATGCTAACGTTCTTTTCCGGACAAAATTCGTGGATGGCGTTTCCACAGTCCAGAGGACTGTTGCAGCGAAGCCAAGCAGGGAGACAACCCAACAAGCCATTCATATGGCTCTCAAGATGGGGTACAGGCATTTTGACACCGCAAAAATATATGGTTCTGAGCCAGCCGTTGGAAATGCTTTAAGAATGGCGATTGAGGATGGAACCATCCAAAGAGAAGATGTTTTTGTGACATCTAAACTTTGGTGCGCCGATCACCATGATCCTGTTTCAGCACTCAACCAAACTCTACGGTAA |
| Protein: MALKTLSTFLSPLSLPNNHNLTKFSPLLTVNTAVACCYGCGAPLQTTELDAPGYVDIDTYELKKKHRQLRTILCGRCRLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDIAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVASEIQKEKKGSANVGKSAFISALLNMMAERDPAAAAAQKYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQAAVVHSEDLPVLAPRSRLRGQSFPAASKNGMAGTFNSNGLKGFSIFWGGLVRIDVLEALPETCLTFYGPKGLRIHVIPTDEADEFYKKELGVLLTPPTGKDKADEWRGLETAEQLKIKFEDAERPASDVAISGLGWITIEPKRKSLGISESTIADTINELHLAVHVPKPVEVFVRPPIPVGKAGAEWYQYRAMHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAANLQELVYKQGQAGITKATVSVIFDNSDRSRSPLGYEDHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEFALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLKRFCIAYEYVQAERIRDSAVGEVERVKAKIMEIDNDTERTMVEIQDMETNIAKLTAEREATMGGEVKTLSDEVDLLSKSIVQEVSVLHSKEDTLKGERENAEKIVQNIEDLRQSIEEKGIAVQKSEEGAADLKKRVEDLSKSLEENEREYQAVQAGKNSGNEEKCLEDQLVDAKVAVGTAETELKQLKTKITHCEKELGEKTRQLMSKREEAVSVENELNSRQNDVERIKTELESLPYKEGQMEALQKDRASELEMIQKLKDGVRDLSARLSNVQFTYRDPEKNFDRSRVKGVVAKLIKVKDSSTMTALEVTAGGKLYNVVVDTENTGKQLLQKGDLRRRVTIIPLNKIQPNTVPPRVQQDAIRLVGKENAKLALSLVGYDKELESAMEYVFGATFVCKTTDAAKEVAFSREIRTPSVTLEGDIFQPSGLLTGGSRRGGGDLLRQLHDMAECESKLSVHQKRLSEIEAKIAELLPLQKRFMDLKAQLELKMHDLSLFQSRAEKNEHHKLGEMVKSIEKDLEEAKSAIKEKQSLYEKHVSKVLELEKSIREHDNSREGRLKDLERKIKATKSQMQSDSKDLKRHENERERLVMEREAVVQEQASLESQLASLRTQINNLNLEVDEQLAKVNSIKKNRDQLQSQLDSIRLKMKECDSQISSILKEQQKLQHKLSETKLQRKKLENEVKQMEMEQKDSSTKVDRLIEKHAWIATEKQLFGRSGTDYDFASRDPRKAREELDKLQAEQSSLEKRVNKKVMAMFEKAEDEYNDLMSKKNTVENDKSKIKKTIEELDEKKKETLKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKPSRETTQQAIHMALKMGYRHFDTAKIYGSEPAVGNALRMAIEDGTIQREDVFVTSKLWCADHHDPVSALNQTLR |